STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14407.1Putative transcriptional regulator (IclR-family protein). (264 aa)    
Predicted Functional Partners:
ACN17710.1
Putative allophanate hydrolase subunit 1.
  
    0.860
ACN17711.1
Putative allophanate hydrolase subunit 2.
 
    0.849
ACN14406.1
Peptidase (M20/M25/M40 family protein).
       0.747
appA
AppA; ABC-type oligopeptide transport system, substrate binding protein AppA.
 
     0.718
malT
MalT; HTH-type transcriptional regulator MalT.
  
  
 0.630
ACN14400.1
Peptidase (M20 family protein).
 
     0.582
pxpA
Putative lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.575
ACN16467.1
Conserved hypothetical protein.
  
  
 0.555
mdlA
MdlA; Mandelate racemase MdlA; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.496
atoB4
AtoB4; acetyl-CoA acetyltransferase AtoB4 (Acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.496
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.