Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpA1 | atpB1 | HRM2_13320 | HRM2_13350 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.999 |
| atpA1 | atpB2 | HRM2_13320 | HRM2_17820 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpB2; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.997 |
| atpA1 | atpC1 | HRM2_13320 | HRM2_13380 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpC1; ATP synthase F1, epsilon subunit. | 0.998 |
| atpA1 | atpC2 | HRM2_13320 | HRM2_35160 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpC2; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.998 |
| atpA1 | atpD1 | HRM2_13320 | HRM2_13390 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpD1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.998 |
| atpA1 | atpE1 | HRM2_13320 | HRM2_13340 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpE1; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.998 |
| atpA1 | atpE2 | HRM2_13320 | HRM2_17810 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpE2; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.995 |
| atpA1 | atpF1 | HRM2_13320 | HRM2_13330 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpF1; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.995 |
| atpA1 | atpG | HRM2_13320 | HRM2_13310 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpG; ATP synthase F1, gamma subunit AtpG1. | 0.999 |
| atpA1 | atpH | HRM2_13320 | HRM2_35200 | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | AtpH; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.998 |
| atpB1 | atpA1 | HRM2_13350 | HRM2_13320 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpA1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.999 |
| atpB1 | atpB2 | HRM2_13350 | HRM2_17820 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpB2; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.919 |
| atpB1 | atpC1 | HRM2_13350 | HRM2_13380 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpC1; ATP synthase F1, epsilon subunit. | 0.999 |
| atpB1 | atpC2 | HRM2_13350 | HRM2_35160 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpC2; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.993 |
| atpB1 | atpD1 | HRM2_13350 | HRM2_13390 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpD1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.998 |
| atpB1 | atpE1 | HRM2_13350 | HRM2_13340 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpE1; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpB1 | atpE2 | HRM2_13350 | HRM2_17810 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpE2; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.998 |
| atpB1 | atpF1 | HRM2_13350 | HRM2_13330 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpF1; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.998 |
| atpB1 | atpG | HRM2_13350 | HRM2_13310 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpG; ATP synthase F1, gamma subunit AtpG1. | 0.999 |
| atpB1 | atpH | HRM2_13350 | HRM2_35200 | AtpB1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | AtpH; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.997 |
page 1 of 6