STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14499.1Putative glycosyl transferase. (260 aa)    
Predicted Functional Partners:
ACN14497.1
Hypothetical protein.
 
 0.832
ACN13154.1
Conserved hypothetical protein.
     0.794
ACN14498.1
Rhodanese-like domain/cysteine-rich domain protein.
       0.741
ACN15082.1
Polysaccharide deacetylase family protein.
  
  
 0.586
ACN15103.1
Putative polysaccharide deacetylase family protein.
  
  
 0.586
ACN15690.1
Conserved hypothetical protein.
 
     0.585
ACN16529.1
TPR domain family protein.
  
 
 0.549
ACN16274.1
Predicted polyketide synthase.
  
 
 0.513
thrS1
ThrS1; threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS).
  
  
 0.492
ACN15092.1
Hypothetical protein.
  
  
 0.492
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.