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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdx5Fdx5; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx5. (233 aa)    
Predicted Functional Partners:
fdhA4
FdhA4; Formate dehydrogenase, alpha chain FdhA4; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 
 0.968
napH
NapH; Iron-sulfur binding protein NapH (4Fe-4S ferredoxin).
 
 
 0.959
ACN14548.1
Iron-sulfur cluster-binding protein.
 
 
 0.886
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
   
 
 0.884
fdhA1
FdhA1; NADH-dependent, cytoplasmic formate dehydrogenase, alpha subunit FdhA1 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.850
fdhA3
FdhA3; NADH-dependent, cytoplasmic formate dehydrogenase, alpha chain FdhA3 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.850
fdhA5
FdhA5; NADH-dependent, cytoplasmic formate dehydrogenase FdhA5 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.850
fdhA6
FdhA6; NADH-dependent, cytoplasmic formate dehydrogenase FdhA6 (selenocysteine protein).
   
 
 0.850
fdhB4
FdhB4; Formate dehydrogenase, beta chain FdhB4 (4Fe-4S family protein).
   
 
 0.797
hdrA3
HdrA3; Heterodisulfide reductase HdrA3 (first part of two subunit HdrA3).
       0.773
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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