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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhB4FdhB4; Formate dehydrogenase, beta chain FdhB4 (4Fe-4S family protein). (282 aa)    
Predicted Functional Partners:
hdrA3
HdrA3; Heterodisulfide reductase HdrA3 (first part of two subunit HdrA3).
 
   0.950
mvhD4
MvhD4; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD4 (4Fe-4S).
 
 
   0.949
hdrA3-2
HdrA3; Heterodisulfide reductase HdrA3' (second part of two subunit HdrA3).
 
   0.944
hdrF2
HdrF2; Heterodisulfide reductase, subunit HdrF2 (selenocysteine containing protein, HdrCB homoloque).
 
 
 0.939
ACN14547.1
Putative heterodisulfide reductase, subunit HdrC.
 
   0.833
mvhD5
MvhD5; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD5 (selenocysteine protein; 4Fe-4S).
 
   0.833
mvhD6
MvhD6; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD6 (4Fe-4S).
 
   0.820
hdrD2-2
HdrD2; Heterodisulfide reductase, subunit HdrD2' (HdrB homologue protein).
 
 
 0.819
mvhD2
MvhD2; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD2 (selenocysteine protein; 4Fe-4S).
 
   0.817
mvhD3
MvhD3; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD3 (selenocysteine protein; 4Fe-4S).
 
   0.811
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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