STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14552.1Putative outer membrane protein TolC. (168 aa)    
Predicted Functional Partners:
ACN17207.1
Peptidase M28B family protein.
  
 
 0.539
ACN14667.1
Multidrug efflux system, efflux pump.
  
 
 0.534
ACN17900.1
Putative secretion protein.
  
 
 0.534
ACN17366.1
Putative membrane efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.516
ACN15217.1
Hypothetical protein.
  
 
 0.514
ACN17794.1
Secretion protein, HlyD family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.454
ACN14553.1
Transcriptional regulator (OmpR family protein).
       0.441
mdtA
MdtA; Multidrug resistance protein MdtA (multidrug transporter MdtA) [precursor]; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.427
mdtC
MdtC; Multidrug resistance protein MdtC (cation/multidrug efflux pump MdtC); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.419
arcE
ArcE; Cation/multidrug efflux pump, periplasmic resistance protein AcrE (Acriflavine resistance protein E precursor); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.411
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.