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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD1LolD1; Lipoprotein-releasing system, ATP-binding protein LolD. (228 aa)    
Predicted Functional Partners:
ACN13697.1
Putative macrolipide-specific ABC-type efflux carrier (MacA conjunction protein).
 
 
 0.959
lolC
LolC; Lipoprotein ABC transporter, permease protein LolC.
 
 0.925
lolD3
LolD3; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
  
 
0.923
ACN14557.1
ABC-type transporter, permease protein.
 
 
 0.915
ACN14740.1
ABC-type transporter, permease component.
 
 
 0.825
ACN14555.1
Hypothetical protein.
       0.789
ACN13519.1
Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.786
cbiO3
CbiO3; ABC-type cobalt importer, ATP-binding protein CbiO3.
 
  
 0.773
ACN17100.1
ABC-type transport system, ATP-binding protein.
  
     0.751
cbiO4
CbiO4; ABC-type cobalt importer, ATP-binding protein CbiO4.
  
     0.716
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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