STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14557.1ABC-type transporter, permease protein. (446 aa)    
Predicted Functional Partners:
ACN14555.1
Hypothetical protein.
 
     0.955
lolD1
LolD1; Lipoprotein-releasing system, ATP-binding protein LolD.
 
 
 0.915
ACN14558.1
Putative NosL protein.
 
     0.895
ACN14560.1
Hypothetical protein.
 
     0.785
fixO
FixO; Cytochrome C oxidase, mono-heme subunit FixO.
 
     0.593
ACN13696.1
Predicted ABC-type transporter, ATP-binding protein.
  
 
 0.580
ACN13944.1
ABC-type transporter, ATP-binding protein.
  
 
 0.580
ACN14739.1
ABC-type transporter, ATP-binding protein (ATPase).
  
 
 0.580
lolD2
LolD2; ABC-type lipoprotein transporter, ATP binding component LolD (ATPase).
  
 
 0.580
ACN16976.1
ABC-type lipoprotein release transporter, ATP-binding protein (ATPase).
  
 
 0.580
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.