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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14560.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
ACN16339.1
Predicted ABC-type transport system, membrane protein.
  
 
 0.870
ACN14557.1
ABC-type transporter, permease protein.
 
     0.785
ACN14555.1
Hypothetical protein.
 
     0.758
recQ1
RecQ1; ATP-dependent helicase RecQ.
   
    0.547
hsdR3
HsdR3; Type I site-specific restriction-modification system, restriction subunit HsdR (helicase family protein); Belongs to the peptidase S24 family.
   
    0.547
ACN17249.1
Conserved hypothetical protein.
  
     0.468
ACN16309.1
Putative ketopantoate reductase.
  
     0.464
cmk4
Cmk4; Cytidine monophosphate kinase Cmk.
  
     0.426
ACN17211.1
Conserved hypothetical protein.
  
     0.425
ACN14120.1
Hypothetical cytidylate kinase.
  
     0.418
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.