STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14561.1Putative sugar nucleotide epimerase. (307 aa)    
Predicted Functional Partners:
blc
Blc; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
     0.918
minE
MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
  
 0.614
ACN14124.1
Iron-containing alcohol dehydrogenase.
   
    0.521
zupT
ZupT; Heavy-metal cation transporter ZupT.
  
    0.514
cydB1
CydB1; Cytochrome bd-type ubiquinol oxidase, subunit II (CydB).
       0.497
cydA1
CydA1; Cytochrome bd-type ubiquinol oxidase, subunit I (CydA).
       0.497
ACN17330.1
TroR; Iron-dependent transcription repressor protein TroR.
   
    0.480
ACN17686.1
Conserved hypothetical protein.
   
    0.457
ACN16491.1
Putative ABC-type manganese/zinc transport system, permease component.
   
    0.408
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.