STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydA1CydA1; Cytochrome bd-type ubiquinol oxidase, subunit I (CydA). (468 aa)    
Predicted Functional Partners:
cydB1
CydB1; Cytochrome bd-type ubiquinol oxidase, subunit II (CydB).
 0.999
cydB2
CydB2; Cytochrome bd-type ubiquinol oxidase, subunit II (CydB).
 
 0.993
cydA2
CydA2; Cytochrome bd-type ubiquinol oxidase, subunit I (CydA).
  
  
 
0.909
ACN17176.1
ATPase family protein.
  
  
 0.748
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
     
 0.683
nox1
Nox1; NADH oxidase (NOXase).
  
 
 0.621
ACN13919.1
FAD/NADH-dependent pyridinepyridine nucleotide-disulphide oxidoreductase.
   
 
 0.586
nox3
Nox3; FAD-dependent pyridine nucleotide-disulphide oxidoreductase Nox (NOXase).
   
 
 0.586
hyfI
HyfI; Hydrogenase HyfI homolog, small subunit.
    
 0.585
putA1
PutA1; Bifunctional protein PutA [Includes: Proline dehydrogenase; P5C dehydrogenase].
   
 
 0.561
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.