STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ubiGUbiG; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (232 aa)    
Predicted Functional Partners:
rpiB
RpiB; Ribose-5-phosphate isomerase RpiB (phosphoriboisomerase B).
      0.911
ACN14045.1
Hypothetical protein.
   
   0.779
rlmE
Putative ribosomal RNA methyltransferase 1 (23S rRNA methylase); Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
  
   
 0.652
ACN16274.1
Predicted polyketide synthase.
  
 
 0.649
etfO
EtfO; Accepts electrons from ETF and reduces ubiquinone.
 
  
 0.628
ispB
IspB; Octaprenyl-diphosphate synthase IspB; Belongs to the FPP/GGPP synthase family.
 
 
 0.617
ACN14567.1
Putative polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
 
 
 0.612
dksA1
DksA1; DnaK suppressor protein DksA.
 
     0.607
ubiE4
UbiE4; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
 
 
 0.573
ubiB1
UbiB; Ubiquinone biosynthesis protein UbiB.
  
 
 0.536
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.