STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ACN14567.1Putative polyprenyltransferase; Belongs to the UbiA prenyltransferase family. (307 aa)    
Predicted Functional Partners:
vdcC
VdcC; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein VdcC; Belongs to the UbiD family.
    
 0.918
ubiX
Putative 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.918
ubiA
UbiA; Predicted 4-hydroxybenzoate polyprenyltransferase UbiA; Belongs to the UbiA prenyltransferase family.
     
  0.900
ispB
IspB; Octaprenyl-diphosphate synthase IspB; Belongs to the FPP/GGPP synthase family.
  
 
 0.837
ubiG
UbiG; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
 
 0.612
ACN16274.1
Predicted polyketide synthase.
  
  
 0.574
etfO
EtfO; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.543
lgt
Lgt; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
    0.522
ACN16399.1
Putative amino-acid acetyltransferase.
     
 0.507
ACN16079.1
Hypothetical protein.
  
 
 0.488
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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