STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdS1HsdS1; Type I site-specific restriction-modification system, specificity subunit HsdS. (393 aa)    
Predicted Functional Partners:
hsdM1
HsdM1; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
 
 0.997
hsdM2
HsdM2; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
 
 0.975
hsdM3
HsdM3; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
 
 
 0.973
hsdR1
HsdR1; Type I site-specific restriction-modification system, restriction subunit HsdR.
 
 
 0.957
hsdR2
HsdR2; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.902
ACN14580.1
Conserved hypothetical protein.
 
     0.876
ACN14581.1
Hypothetical protein.
       0.789
hsdR3
HsdR3; Type I site-specific restriction-modification system, restriction subunit HsdR (helicase family protein); Belongs to the peptidase S24 family.
 
 
 0.774
recQ1
RecQ1; ATP-dependent helicase RecQ.
 
 
 0.737
ACN13254.1
Subunit of type I site-specific restriction enzyme R; Contains deoxyribonuclease domain.
 
  
 0.687
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.