STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixNFixN; Cytochrome C oxidase, polypeptide subunit FixN (cytochrome cbb3, subunit 1). (430 aa)    
Predicted Functional Partners:
fixO
FixO; Cytochrome C oxidase, mono-heme subunit FixO.
 0.999
ACN14623.1
Conserved hypothetical protein.
 
 
 0.979
ACN14615.1
Hypothetical protein.
 
 
 0.975
ACN14621.1
Cytochrome c family protein.
 
 
 0.912
ACN14152.1
Hypothetical protein.
  
 
 0.911
ACN14559.1
Conserved hypothetical protein.
 
   
 0.810
ACN14618.1
Putative cbb3-type cytochrome C oxidase maturation protein CcoS.
     
 0.792
mopC
MopC; Molybdopterin oxidoreductase, membrane subunit MopC.
 
   
 0.789
mopA
MopA; Molybdopterin oxidoreductase, iron-sulfur binding subunit MopA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.787
ACN14994.1
Putative cytochrome c, class III family protein.
 
 
 0.751
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.