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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14652.1Sigma-54 dependent transcriptional regulator/response regulator. (455 aa)    
Predicted Functional Partners:
ACN14653.1
Two-component hybrid sensor and response regulator histidine kinase.
 
 
 0.934
adh6
Adh6; Iron-containing alcohol dehydrogenase Adh2.
 
     0.803
ACN16843.1
Two-component sensory box histidine kinase/response regulator.
 
 
 
 0.631
ACN13250.1
Signal transduction histidine kinase (ATPase).
 
 
 0.596
ACN17656.1
Signal transduction histidine kinase.
 
 
 
 0.596
rpoN
RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.584
atoS3
AtoS3; Sensor protein AtoS3 (PAS domain protein).
 
 
 
 0.546
ACN17244.1
Sensory box histidine kinase.
 
 
 
 0.509
cheA2
CheA2; Chemotaxis protein CheA.
  
 
 0.501
ACN16174.1
Fusion protein comosed of N:signal transduction protein - C:ATPase-like osmosensitive K+ channel histidine kinase.
 
 
 0.498
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.