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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14667.1Multidrug efflux system, efflux pump. (347 aa)    
Predicted Functional Partners:
ACN14670.1
ABC-type transporter, permease component.
  
 0.971
ACN14669.1
ABC-type transporter, permease component.
  
 0.967
ACN14668.1
Multidrug efflux system, ATP-binding protein (ATPase).
  
 0.959
ACN14666.1
Multidrug efflux system, outer membrane subunit.
  
 
 0.888
ACN17898.1
ABC-type transport system, permease component.
  
 0.832
ACN17899.1
ABC-type transport system, ATP-binding protein.
  
 0.715
ACN17792.1
Putative outer membrane protein.
 
 
 0.660
mdtP1
MdtP1; Cation/multidrug efflux pump, outer membrane efflux protein MdtP.
 
 
 0.644
ACN14692.1
RND efflux transporter, outer membrane lipoprotein.
 
 
 0.593
ACN17365.1
Acriflavin resistance family protein (AcrB/AcrD/AcrF family protein); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.580
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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