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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14699.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
uroD
UroD; Uroporphyrinogen decarboxylase UroD; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.800
hemE
HemE; Uroporphyrinogen decarboxylase HemE (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.770
ACN16953.1
Ferredoxin (4Fe-4S iron-sulfur cluster binding protein).
 
    0.740
fdx7
Fdx7; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx7.
 
    0.732
fdx8
Fdx8; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx8.
 
    0.703
mttB6
MttB6; Trimethylamine methyltransferase MttB (TMA methyltransferase).
 
   
 0.695
mttB5
MttB5; Trimethylamine methyltransferase MttB (TMA methyltransferase).
 
   
 0.693
ACN17743.1
Metal-binding protein.
 
    0.687
ACN13715.1
Conserved hypothetical protein.
 
     0.648
mttB8
MttB8; Trimethylamine methyltransferase MttB (TMA methyltransferase).
 
   
 0.633
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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