STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbd1Hbd1; 3-hydroxybutyryl-CoA dehydrogenase Hbd1. (282 aa)    
Predicted Functional Partners:
crtA2
CrtA2; 3-hydroxybutyryl-CoA dehydratase CrtA (Crotonase); Belongs to the enoyl-CoA hydratase/isomerase family.
 0.996
caiD1
CaiD1; enoyl-CoA hydratase/carnithine racemase CaiD.
 0.994
caiD2
CaiD2; enoyl-CoA hydratase / isomerase protein CaiD; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.992
atoB1
AtoB1; acetyl-CoA acetyltransferase AtoB1; Belongs to the thiolase-like superfamily. Thiolase family.
 0.986
atoB3
AtoB3; acetyl-CoA acetyltransferase AtoB3 (acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
 0.985
atoB2
AtoB2; acetyl-CoA acetyltransferase AtoB2; Belongs to the thiolase-like superfamily. Thiolase family.
 0.984
atoB5
AtoB5; acetyl-CoA acetyltransferase AtoB5 (Acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.972
ACN14111.1
enoyl-CoA hydratase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.956
crtA1
CrtA1; 3-hydroxybutyryl-CoA dehydratase Crt.
 
 0.956
fadA
FadA; 3-ketoacyl-CoA thiolase FadA (Acetyl-CoA acyltransferase); Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.931
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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