STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14734.1Putative protein phosphatase. (340 aa)    
Predicted Functional Partners:
ACN15672.1
Putative WD-40 repeat protein.
  
 0.989
lepA
LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
 0.891
ppsA4
PpsA4; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA4 (PEP synthase).
 
   
 0.881
ACN13537.1
Putative ankyrin repeat protein.
   
 0.855
phnD
PhnD; ABC-type phosphate/phosphonate transport system, periplasmic binding protein PhnD.
 
   
 0.798
ACN13699.1
Putative cytoplasmic protein YrbL.
   
 0.787
ACN13750.1
Hypothetical protein.
   
 0.787
kdkA
KdkA; 3-deoxy-D-manno-octulosonic acid kinase KdkA (KDO kinase).
   
 0.787
ACN14732.1
Sensory box histidine kinase/response regulator.
 
     0.770
ACN14323.1
Conserved hypothetical membrane protein.
  
   
 0.748
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.