STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsM3AcsM3; middle-chain-fatty-acid-acyl-CoA synthetase AcsM3 (AMP-binding protein). (548 aa)    
Predicted Functional Partners:
ACN16274.1
Predicted polyketide synthase.
  
 0.887
ACN13428.1
acyl-CoA dehydrogenase family protein.
 
 
 0.665
ACN14760.1
NADP-reducing hydrogenase, subunit B.
       0.658
ACN14761.1
Sensory signal transduction histidine kinase (ATPase domain protein).
     
 0.658
ACN14762.1
Metal-dependent phosphoesterase (PHP family protein).
       0.658
ACN13423.1
acyl-CoA dehydrogenase (ACAD) / acyl-CoA oxidase-like protein.
 
 
 0.656
acd17
Acd17; acyl-CoA dehydrogenase Acd17.
 
 
 0.623
acd2
Acd2; acyl-CoA dehydrogenase Acd2.
 
 
 0.621
acd5
Acd5; Short-chain specific acyl-CoA dehydrogenase/oxidase Acd5 (butyryl-CoA dehydrogenase).
 
 
 0.620
acd10
Acd10; acyl-CoA dehydrogenase Acd10.
 
 
 0.620
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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