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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14760.1NADP-reducing hydrogenase, subunit B. (122 aa)    
Predicted Functional Partners:
ACN14763.1
Iron-sulfur binding hydrogenase.
 
 
 
 0.957
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
 
 
 0.951
ACN14761.1
Sensory signal transduction histidine kinase (ATPase domain protein).
 
   
 0.950
ACN14762.1
Metal-dependent phosphoesterase (PHP family protein).
 
     0.948
rsbW2
RsbW2; Anti-sigma regulatory factor RsbW2 (serine/threonine protein kinase).
 
   
 0.898
ACN14765.1
Hypothetical protein.
 
     0.898
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
 
   
 0.827
hydA2
HydA2; Fe-only fusion hydrogenase HydA2 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
 
 
 
 0.741
hydA1
HydA1; Fe-only fusion hydrogenase HydA1 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
 
 
 
 0.733
acsM3
AcsM3; middle-chain-fatty-acid-acyl-CoA synthetase AcsM3 (AMP-binding protein).
       0.658
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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