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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nuoFNuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF. (595 aa)    
Predicted Functional Partners:
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
 0.999
soxA2
SoxA2; Sarcosine oxidase, subunit alpha SoxA.
  
 0.995
ACN14763.1
Iron-sulfur binding hydrogenase.
 
 
 
 0.989
gltD3
GltD3; Glutamate synthase, beta chain GltD.
 
 0.986
hydA2
HydA2; Fe-only fusion hydrogenase HydA2 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
 
 
 
 0.979
hydA1
HydA1; Fe-only fusion hydrogenase HydA1 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
 
 
 0.974
fdx4
Fdx4; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx4.
 
 0.955
rnfB-3
Putative NADPH-dependent glutamate synthase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
  
 0.955
fdhA6
FdhA6; NADH-dependent, cytoplasmic formate dehydrogenase FdhA6 (selenocysteine protein).
 
 0.951
fdhA5
FdhA5; NADH-dependent, cytoplasmic formate dehydrogenase FdhA5 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.950
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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