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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cooCCooC; Carbon monoxide dehydrogenase nickel-insertion accessory protein CooC. (260 aa)    
Predicted Functional Partners:
cdhA
CdhA; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, alpha subunit CdhA (corrinoid/iron-sulfur protein).
 
   
 0.968
cdhC
CdhC; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, beta subunit CdhC.
 
  
 0.963
cdh1
Cdh1; Carbon-monoxide dehydrogenase Cdh1 (CODH1).
 
   
 0.961
cdh2
Cdh2; Carbon-monoxide dehydrogenase Cdh2 (CODH2).
 
   
 0.961
cdhE
CdhE; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, gamma subunit CdhE.
 
  
 0.893
cdhD
CdhD; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, delta subunit CdhD.
 
  
 0.889
ACN13478.1
NADH oxidase.
     
 0.807
coxL
CoxL; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL.
      
 0.802
ACN13161.1
Predicted Fe-S cluster protein.
  
     0.760
ACN16539.1
Hypothetical protein.
 
  
 0.760
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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