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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdhECdhE; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, gamma subunit CdhE. (446 aa)    
Predicted Functional Partners:
metH3
MetH3; vitamin-B12 dependent methionine synthase MetH (5-methyltetrahydrofolate--homocysteine methyltransferase).
 
 0.998
cdhC
CdhC; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, beta subunit CdhC.
 
 0.998
cdhD
CdhD; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, delta subunit CdhD.
 
 0.998
cdhA
CdhA; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, alpha subunit CdhA (corrinoid/iron-sulfur protein).
 
  
 0.987
cdh2
Cdh2; Carbon-monoxide dehydrogenase Cdh2 (CODH2).
 
  
 0.979
cdh1
Cdh1; Carbon-monoxide dehydrogenase Cdh1 (CODH1).
 
  
 0.978
metH1
MetH1; vitamin-B12 dependent methionine synthase MetH (5-methyltetrahydrofolate--homocysteine methyltransferase).
  
 0.952
ACN14776.1
Hypothetical protein.
  
 
 0.923
acsA1
AcsA1; acetyl-CoA synthetase/acetate-CoA ligase AcsA1 (AMP-binding protein).
  
 
 0.921
ACN16451.1
Iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein).
  
 
  0.915
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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