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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhA6FdhA6; NADH-dependent, cytoplasmic formate dehydrogenase FdhA6 (selenocysteine protein). (921 aa)    
Predicted Functional Partners:
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
 
 0.995
rnfB-3
Putative NADPH-dependent glutamate synthase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 0.991
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
 
 0.951
ACN16451.1
Iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein).
  
 0.948
ACN17399.1
4Fe-4S iron-sulfur binding protein (ferredoxin).
  
 
 0.934
hyfI
HyfI; Hydrogenase HyfI homolog, small subunit.
 
 
 0.920
ACN13468.1
Formylmethanofuran dehydrogenase/molybdopterin biosynthesis fusion protein.
  
 
 0.916
cdhA
CdhA; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, alpha subunit CdhA (corrinoid/iron-sulfur protein).
    
 0.910
cdh1
Cdh1; Carbon-monoxide dehydrogenase Cdh1 (CODH1).
    
 0.910
cdh2
Cdh2; Carbon-monoxide dehydrogenase Cdh2 (CODH2).
    
 0.910
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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