STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsACdsA; Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase); Belongs to the CDS family. (269 aa)    
Predicted Functional Partners:
pgsA
PgsA; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase PgsA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.968
ACN17597.1
Putative phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.965
uppS
UppS; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
      0.954
plsC
PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC (1-AGP acyltransferase); Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
 
 0.918
dgkA
DgkA; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
  0.900
frr
Frr; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
 
     0.870
pyrH
PyrH; Catalyzes the reversible phosphorylation of UMP to UDP.
 
     0.847
dxr
Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.807
ACN14823.1
Membrane-associated zinc metalloprotease.
       0.783
purQ
PurQ; Phosphoribosylformylglycinamidine synthase I.
       0.770
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.