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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14830.1Penicillin binding family protein. (760 aa)    
Predicted Functional Partners:
ACN14829.1
Conserved hypothetical protein.
 
   
 0.953
mrcA
MrcA; Penicillin-binding protein 1A [Includes: Penicillin-insensitive transglycosylase; Penicillin-sensitive transpeptidase ].
 
 
0.946
mrcB
MrcB; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).
  
  
 
0.923
divIVA
DivIVA; Cell-division initiation protein DivIVA.
   
 
 0.824
ftsI
FtsI; Peptidoglycan glycosyltransferase FtsI (Penicillin-binding protein) (PBP).
 
 
 
 0.812
ACN16809.1
Conserved hypothetical protein.
    
 
 0.736
ACN15656.1
TPR repeat family protein.
 
 
 
 0.695
mrdA
MrdA; Penicillin-binding protein MrdA (PBP) (transpeptidase).
 
 
 
 0.645
ACN16237.1
Conserved hypothetical protein.
   
 
 0.624
ftsW
FtsW; Cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.571
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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