STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14838.1Tyrosine recombinase XerD; Belongs to the 'phage' integrase family. (384 aa)    
Predicted Functional Partners:
ACN14839.1
Hypothetical protein.
       0.773
ACN13177.1
Phage integrase/recombinase family protein; Belongs to the 'phage' integrase family.
  
   
 0.771
ACN16500.1
Phage integrase/recombinase family protein; Belongs to the 'phage' integrase family.
  
   
 0.769
xerC
XerC; Phage-specific tyrosine recombinase/integrase XerC; Belongs to the 'phage' integrase family.
  
   
 0.647
ftsK1
FtsK1; DNA movement protein/cell devision protein FtsK.
  
   
 0.472
ftsK2
FtsK2; Predicted DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
  
   
 0.446
ACN14841.1
Hypothetical protein.
 
   
 0.437
ACN14840.1
Hypothetical protein.
       0.425
comF
ComF; Competence protein F (Phosphoribosyltransferase family protein).
   
    0.416
endA1
EndA1; Endonuclease I [precursor].
       0.403
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.