STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpI2AtpI2; ATP synthase F0F1 protein AtpI2. (78 aa)    
Predicted Functional Partners:
ACN14887.1
Conserved hypothetical protein associated with ATP synthase F0F1.
  
    0.961
atpB2
AtpB2; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
 
  
 0.900
ACN16803.1
Putative metal-dependent hydrolase of the beta-lactamase superfamily.
  
     0.738
ACN16299.1
Putative ATPase.
  
     0.710
atpE2
AtpE2; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
  
 0.695
selD1
SelD1; Selenide water dikinase 1 SelD.
       0.680
ACN17992.1
Conserved hypothetical protein.
  
     0.621
atpF3
AtpF3; ATP synthase F0, B' subunit; Belongs to the ATPase B chain family.
 
  
 0.598
ACN15559.1
GTPase family protein.
  
     0.586
glmS
GlmS; Glucosamine--fructose-6-phosphate aminotransferase (D-fructose-6- phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase).
  
     0.576
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.