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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hldEHldE; ADP-heptose synthase/bifunctional sugar kinase/adenylyltransferase HldE. (149 aa)    
Predicted Functional Partners:
tagB2
TagB2; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB2.
 
     0.849
ACN14463.1
Putative carbohydrate kinase (PfkB family protein).
 
     0.831
rfaF
RfaF; ADP-heptose:LPS heptosyltransferase RfaF (glycosyltransferase family protein).
 
  
 0.800
gmhA
GmhA; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
 
   
 0.775
gmhB
GmhB; D,D-heptose 1,7-bisphosphate phosphatase GmhB.
 
   
 0.770
ACN14921.1
Hypothetical protein.
       0.701
kdsD
KdsD; Arabinose 5-phosphate isomerase KdsD; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.491
ACN14922.1
Putative tarF (CDP-glycerol glycerophosphotransferase family protein).
       0.441
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.