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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14922.1Putative tarF (CDP-glycerol glycerophosphotransferase family protein). (385 aa)    
Predicted Functional Partners:
ACN15537.1
ABC-type transport system involved in resitance to organic solvents, periplasmic substrate-binding protein.
  
     0.575
ACN16753.1
Putative flagellin.
  
  
 0.552
ACN16754.1
Putative flagellar hook-associated protein.
  
    0.530
ACN16079.1
Hypothetical protein.
 
  
 0.477
ACN14921.1
Hypothetical protein.
       0.463
ACN13979.1
Zn-dependent dehydrogenase.
 
  
 0.451
hldE
HldE; ADP-heptose synthase/bifunctional sugar kinase/adenylyltransferase HldE.
       0.441
rfbD
RfbD; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.433
tagB2
TagB2; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB2.
       0.426
ACN15538.1
ABC-type transport system involved in resitance to organic solvents, ATP-binding protein.
 
     0.423
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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