STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prcPrc; Tail-specific protease Prc [precursor] (Protease Re) (PRC protein) (C-terminal-processing peptidase); Belongs to the peptidase S41A family. (691 aa)    
Predicted Functional Partners:
ACN14982.1
GTP-binding family protein (GTPase); Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.787
ACN14983.1
Hypothetical protein.
       0.773
ppiC1
PpiC1; Peptidyl-prolyl cis-trans isomerase PpiC.
  
 
 0.606
ACN15391.1
Putative translation initiation factor 1A-3 (aIF-1A-3).
  
     0.531
pcb
Pcb; Pyruvate carboxylase Pcb (Pyruvic carboxylase) (PCB).
  
    0.531
ACN14978.1
Hypothetical protein.
 
     0.528
ACN16617.1
Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
 
     0.528
recX
RecX; Modulates RecA activity; Belongs to the RecX family.
   
 
 0.522
ACN14260.1
Putative metallopeptidase.
  
  
 0.507
ACN14068.1
Conserved hypothetical protein.
  
     0.501
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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