STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15012.1Site-specific recombinase/integrase XerD. (197 aa)    
Predicted Functional Partners:
ACN15013.1
Hypothetical protein.
       0.564
mazF
MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
   
 0.474
nifD1
NifD1; Nitrogenase associated molybdenum-iron protein, alpha chain NifD.
  
     0.436
btuB2
BtuB2; Outer membrane cobalamin (Vitamin B12) translocator/receptor protein BtuB.
  
     0.419
comF
ComF; Competence protein F (Phosphoribosyltransferase family protein).
   
    0.416
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.