STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
istAPutative integrase family protein. (500 aa)    
Predicted Functional Partners:
istB1
IstB1; Transposition helper protein IstB (ATP-binding protein).
 
  
 0.946
parB
ParB; Chromosome partitioning protein parB.
       0.773
ACN15025.1
Putative DNA primase.
       0.768
istB2
IstB2; Transpositon helper protein IstB.
 
  
 0.698
ACN17008.1
Transposase (IS21 family protein).
 
  
 0.688
istB3
IstB3; Transposition helper protein IstB.
 
  
 0.687
ACN17493.1
Putative ATP-binding family protein.
 
  
 0.664
ACN15021.1
Hypothetical protein.
       0.548
ACN13477.1
Conserved hypothetical protein.
  
     0.452
ACN15638.1
Archae-like transposase.
  
     0.440
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.