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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
istB1IstB1; Transposition helper protein IstB (ATP-binding protein). (246 aa)    
Predicted Functional Partners:
istA
Putative integrase family protein.
 
  
 0.946
istA2
IstA2; Transposase IstA (IS21 family protein).
  
 0.831
istA3
IstA3; Transposase for insertion sequences IS1326/IS1353 (IS21/IS408/IS1162 family protein).
  
 0.811
istA5
IstA5; Transposase for insertion sequences IS1326/IS1353 (IS21/IS408/IS1162 family protein).
  
 0.811
parB
ParB; Chromosome partitioning protein parB.
       0.773
ACN15025.1
Putative DNA primase.
       0.768
ACN14841.1
Hypothetical protein.
  
 
 0.614
dnaB
DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.614
ACN17849.1
Replicative DNA helicase.
  
 
 0.614
ACN15021.1
Hypothetical protein.
       0.543
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.