STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15040.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
ACN17389.1
Hypothetical protein.
 
     0.790
ACN15028.1
Integrase family protein.
  
     0.731
ACN17522.1
Integrase family protein.
  
     0.731
lysM1
LysM1; Peptidoglycan-binding protein LysM.
  
     0.643
ACN13483.1
Putative virulence factor (pectin lyase fold protein).
  
     0.639
ACN15613.1
Conserved hypothetical protein.
 
     0.609
ACN15638.1
Archae-like transposase.
  
     0.606
ACN15838.1
ABC-type amino acid transporter, periplasmic amino-acid binding protein.
  
     0.574
ACN15123.1
Conserved hypothetical protein.
  
     0.570
ACN15124.1
UDP glycosyltransferase family protein.
  
     0.569
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.