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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdR2HsdR2; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1005 aa)    
Predicted Functional Partners:
hsdM2
HsdM2; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
 
 0.983
hsdS2
HsdS2; Type I restriction-modification system, specificity protein HsdS.
 
  
 0.970
ACN15053.1
Metal-dependent hydrolase family protein.
 
   
 0.934
hsdM1
HsdM1; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
 
 
 0.931
hsdM3
HsdM3; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
 
 
 0.912
hsdS1
HsdS1; Type I site-specific restriction-modification system, specificity subunit HsdS.
 
  
 0.902
ACN13254.1
Subunit of type I site-specific restriction enzyme R; Contains deoxyribonuclease domain.
  
     0.725
hsdS3
HsdS3; Restriction endonuclease S HsdS.
 
  
 0.684
ACN17530.1
Conserved hypothetical protein.
  
    0.679
ACN13253.1
Hypothetical protein.
 
    0.675
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.