STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15099.1Glycosyl transferase (group 1 family protein). (390 aa)    
Predicted Functional Partners:
rfaL
RfaL protein (O-antigen ligase family protein).
 
  
 0.918
ACN15103.1
Putative polysaccharide deacetylase family protein.
 
  
 0.900
ACN15095.1
Hypothetical protein.
 
     0.899
rfaG2
RfaG2; Glycosyl-/hexosyl-transferase RfaG.
 
    
0.851
ACN15104.1
Putative coenzyme F390 synthetase FtsA.
 
     0.833
cpsE
CpsE; Galactosyl transferase CspE (type III capsular polysaccharide synthesis).
 
  
 0.810
carB1
CarB1; Carbamoyl-phosphate synthase, large subunit CarB1.
 
     0.810
gmhA
GmhA; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
 
  
 0.804
ACN15086.1
Glycosyl transferase (group I).
 
     0.783
ACN15082.1
Polysaccharide deacetylase family protein.
 
  
 0.782
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.