STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysKCysK; Cysteine synthase CysK (pyridoxal-phosphate dependent enzyme). (63 aa)    
Predicted Functional Partners:
cysA1
CysA1; Cysteine synthase CysA1 (O-acetylserine sulfhydrylase A).
 
     0.775
mdeA
MdeA; Methionine gamma-lyase MdeA (L-methionase).
  
 
 0.771
cysE1
CysE1; Serine O-acetyltransferase CysE1 (bacterial transferase hexapeptide repeat family).
 
 
 0.761
capA
CapA; Capsular biosynthesis protein CapA (poly-gamma-glutamate biosynthesis).
       0.723
pyrK
PyrK; Dihydroorotate dehydrogenase, electron transfer subunit PyrK.
     
 0.723
ACN15108.1
Putative VanZ-like membrane protein.
       0.714
sat1
Sat1; Bifunctional sulfate adenyltransferase Sat1 (ATP sulfurylase (SUL) / adenylylsulfate kinase (KIN) domain).
  
  
 0.709
cysE2
CysE2; Serine O-acetyltransferase CysE2 (bacterial transferase hexapeptide repeat family).
  
 
 0.705
moeD
MoeD; Molybdopterin converting factor, small subunit MoeD.
  
 
 0.622
gltB2
GltB2; Glutamate synthase [NADPH], large chain (NADPH-GOGAT).
     
 0.552
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.