STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
istA1IstA1; Transposase/integrase IstA (IS 21 family protein). (282 aa)    
Predicted Functional Partners:
ACN15112.1
Transposase (class V family protein).
 
     0.948
ACN16556.1
Transposase (IS3/IS911 family protein).
 
     0.779
ACN17496.1
Transposase family protein.
 
     0.779
cysK
CysK; Cysteine synthase CysK (pyridoxal-phosphate dependent enzyme).
       0.548
capA
CapA; Capsular biosynthesis protein CapA (poly-gamma-glutamate biosynthesis).
       0.515
pyrK
PyrK; Dihydroorotate dehydrogenase, electron transfer subunit PyrK.
       0.515
ACN15108.1
Putative VanZ-like membrane protein.
       0.509
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.