STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ACN15117.1Putative N-acyl-L-homoserine lactone synthetase. (299 aa)    
Predicted Functional Partners:
moeD
MoeD; Molybdopterin converting factor, small subunit MoeD.
  
 
 0.775
ACN13601.1
Hypothetical protein.
  
 
 0.754
ACN15555.1
Conserved hypothetical protein.
  
 
 0.754
moaE
MoaE; Molybdopterin converting factor, large subunit MoaE.
  
 0.718
thiC
ThiC; Catalyzes the conversion of aminoimidazole ribotide (AIR) to 5-hydroxybenzimidazole (5-HBI) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Is thus involved in the anaerobic biosynthesis of the benzimidazole lower axial ligand of the cobamide produced by D.autotrophicum; Belongs to the ThiC family. 5-hydroxybenzimidazole synthase subfamily.
  
  
 0.622
thiE
ThiE; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
  
 0.596
trxB
TrxB; Thioredoxin reductase (TRXR).
  
  
 0.588
iscS1
IscS1; Cysteine desulfurase IscS (aminotransferase, class V; NifS homolog protein).
   
 0.581
iscS2
IscS2; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
   
 0.581
ACN13547.1
Putative bifunctional enzyme ThiED (Thiamine-phosphate pyrophosphorylase / Phosphomethylpyrimidine kinase).
  
  
 0.572
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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