STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD2LolD2; ABC-type lipoprotein transporter, ATP binding component LolD (ATPase). (254 aa)    
Predicted Functional Partners:
ACN13697.1
Putative macrolipide-specific ABC-type efflux carrier (MacA conjunction protein).
 
 0.987
ACN14740.1
ABC-type transporter, permease component.
 
 0.987
lolE
LolE; ABC-type lipoprotein transporter, permease protein LolE.
 
 
 0.970
lolF
LolF; Outer membrane lipoprotein-sorting protein LolF.
 
 
 
 0.882
ACN17209.1
ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component.
 
 
 0.868
ACN16977.1
ABC-type lipoprotein release transporter, permease component.
 
 
 0.800
ACN15123.1
Conserved hypothetical protein.
 
     0.717
ACN15119.1
Putative dinucleotide-utilizing biosynthesis family protein (molybdopterin and thiamine biosynthesis family protein).
       0.676
lolC
LolC; Lipoprotein ABC transporter, permease protein LolC.
 
 0.659
ACN14738.1
RND efflux transporter (HlyD family secretion protein); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.654
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.