STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15237.14Fe-4S ferredoxin, iron-sulfur binding protein. (355 aa)    
Predicted Functional Partners:
gltD3
GltD3; Glutamate synthase, beta chain GltD.
 
  
 0.759
fadD6
FadD6; long-chain-fatty-acid--CoA ligase FadD6 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
       0.689
gltD2
GltD2; Glutamate synthase [NADPH] small chain (glutamate synthase beta subunit) (NADPH-GOGAT).
 
  
 0.682
ACN15236.1
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
    
0.663
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
 
  
 0.654
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
 
 
 
 0.644
ACN14863.1
Predicted ABC-type molybdate/tungstate transporter, ATP binding protein (ATPase).
  
     0.497
ACN13429.1
Nitroreductase family protein (Putative NADH dehydrogenase/NAD(P)H nitroreductase).
 
     0.449
ACN15235.1
HTH-type transcriptional regulator.
       0.438
ACN15234.1
Conserved hypothetical protein.
       0.427
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.