STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15256.1Putative anthranilate synthase component II. (236 aa)    
Predicted Functional Partners:
dppC1
DppC1; ABC-type oliopeptide/dipeptide transporter, permease protein DppC.
       0.674
dppB1
DppB1; ABC-type oliopeptide/dipeptide transporter, permease protein DppB.
       0.661
dat
Dat; D-alanine aminotransferase Dat.
     
 0.597
glnA1
GlnA1; Type I glutamate-ammonia ligase GlnA1 (glutamine synthetase).
  
  
 0.584
glnA2
GlnA2; Type I glutamate-ammonia ligase GlnA2 (glutamine synthetase).
  
  
 0.584
ACN15258.1
Putative acyltransferase.
       0.473
ACN13959.1
Transcriptional regulator (Cro/CI family protein).
  
  
 0.470
ACN14186.1
Transcriptional regulator (XRE family protein).
  
  
 0.470
ACN14308.1
Transcriptional regulator (XRE-family protein).
  
  
 0.470
comE
ComE; DNA internalization-related competence protein ComE.
     
 0.443
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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