STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vacJVacJ lipoprotein [precursor]. (240 aa)    
Predicted Functional Partners:
ACN15299.1
ABC-type transporter involved in resistance to organic solvents, toluene tolerance protein.
 
 
 
 0.974
ACN15298.1
ABC-type transporter involved in resistance to organic solvents, periplasmic binding component.
 
   
 0.941
ACN15296.1
ABC-type transporter involved in resistance to organic solvents, permease protein.
 
   
 0.827
ACN13229.1
Putative porin D precursor (outer membrane protein D2) (imipenem/basic amino acid-specific outer membrane pore).
    
 
 0.805
ACN17247.1
Conserved hypothetical protein.
    
 
 0.805
ACN15297.1
ABC-type transporter involved in resistance to organic solvents, ATP-binding protein.
 
   
 0.760
ostA
OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.556
ACN17975.1
ABC-type transporter, periplasmic substrate-binding protein.
 
   
 0.498
ompA3
OmpA3; Predicted outer membrane protein OmpA.
  
   
 0.429
ACN17369.1
Conserved hypothetical protein.
   
    0.400
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.