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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eriC2EriC2; Voltage-gated chloride channel protein EriC. (598 aa)    
Predicted Functional Partners:
aspC3
AspC3; Aspartate aminotransferase (Transaminase A) (AspAT).
 
   
 0.828
trkA3
TrkA3; Na+/H+ antiporter (TrkA-N:TrkA-C).
 
   
 0.609
ACN15313.1
Hypothetical protein.
       0.546
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
     
 0.502
alsT
AlsT; Sodium/alanine- (Na+/Ala-) symporter AlsT.
  
    0.491
ACN17403.1
Putative Di- and tricarboxylate transporter.
  
  
 0.482
mae
Mae; NAD/NADP-dependent malate dehydrogenase (malic enzyme) (NAD-ME).
 
   
 0.413
pfkA
ABC-type branched-chain amino acid transporter, periplasmic substrate-binding protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.
     
 0.404
eriC1
EriC1; Voltage gated chloride channel protein EriC.
 
    
0.402
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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