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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15360.1Putative esterase of the alpha-beta hydrolase superfamily. (657 aa)    
Predicted Functional Partners:
ACN15361.1
Sensory box histidine kinase/response regulator.
   
 
 0.789
ACN16274.1
Predicted polyketide synthase.
  
 0.655
ACN16399.1
Putative amino-acid acetyltransferase.
  
 0.573
ACN17411.1
Putative two-component system sensor protein.
  
 
 0.548
comE
ComE; DNA internalization-related competence protein ComE.
     
 0.539
ACN14022.1
Putative two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein).
 
   
 0.537
rpoB
RpoB; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.521
ACN15359.1
TPR domain protein.
       0.500
ACN16529.1
TPR domain family protein.
   
 
 0.499
rpoZ
RpoZ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
 
 0.492
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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