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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15379.1Conserved hypothetical protein. (534 aa)    
Predicted Functional Partners:
ACN15517.1
Two-component protein, sensory box histidine kinase/response regulatory protein.
  
  
 0.845
ACN14537.1
Sensory box histidine kinase/response regulator.
   
  
 0.826
ACN16202.1
Putative HAD-superfamily hydrolase (subfamily IA protein).
  
    0.749
ACN17589.1
Dienelactone hydrolase.
  
  
 0.711
nrdA
NrdA; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
  
 0.699
ACN17189.1
Cation- (Ca++) transporting ATPase, E1-E2 type.
 
  
 0.599
pma1
Pma1; Cation-transporting ATPase Pma1.
 
  
 0.595
pacL
PacL; Cation-transporting ATPase PacL.
 
  
 0.588
ACN15896.1
Sensory box histidine kinase.
   
  
 0.557
spsA
SpsA; Sucrose phosphate synthase (HAD-superfamily).
  
   
 0.492
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.