STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mscC4MscC4; Mechanosensitive small-conductance channel MscC4. (269 aa)    
Predicted Functional Partners:
ACN15380.1
SLC13A transporter family protein (TrkA domain protein).
 
     0.795
trkA3
TrkA3; Na+/H+ antiporter (TrkA-N:TrkA-C).
     
 0.569
ACN15382.1
Conserved hypothetical protein.
       0.527
mptN
MptN; tetrahydromethanopterin:alpha-L-glutamate ligase MptN (H(4)MPT:alpha-L-glutamate ligase); Belongs to the RimK family.
 
   
 0.515
ACN15383.1
Signal transduction family protein (GGDEF domain protein).
     
 0.461
rimK2
RimK2; Ribosomal protein S6 modification protein RimK.
 
   
 0.427
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.